CDS

Accession Number TCMCG080C28037
gbkey CDS
Protein Id XP_027939212.1
Location join(5621294..5621392,5621651..5621770,5621950..5622099,5622398..5622552,5622753..5622914,5623044..5623291,5623384..5623479,5623587..5623723,5623789..5623992,5624099..5624206,5624382..5624432,5624524..5624623,5625725..5625867,5626613..5626713,5626856..5626994,5627167..5627403,5627481..5627603,5627689..5627798,5627883..5627964,5628033..5628233,5628368..5628500,5628590..5628695,5628777..5628851,5628999..5629060,5629351..5629427,5629585..5629715,5629908..5630262,5630378..5630495,5630583..5630656,5630745..5630885)
Gene LOC114193560
GeneID 114193560
Organism Vigna unguiculata

Protein

Length 1345aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA521068
db_source XM_028083411.1
Definition CHD3-type chromatin-remodeling factor PICKLE isoform X3 [Vigna unguiculata]

EGGNOG-MAPPER Annotation

COG_category KL
Description CHD3-type chromatin-remodeling factor
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K11642        [VIEW IN KEGG]
ko:K11643        [VIEW IN KEGG]
EC 3.6.4.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko05165        [VIEW IN KEGG]
ko05203        [VIEW IN KEGG]
map05165        [VIEW IN KEGG]
map05203        [VIEW IN KEGG]
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006338        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008283        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009733        [VIEW IN EMBL-EBI]
GO:0009735        [VIEW IN EMBL-EBI]
GO:0009736        [VIEW IN EMBL-EBI]
GO:0009739        [VIEW IN EMBL-EBI]
GO:0009755        [VIEW IN EMBL-EBI]
GO:0009787        [VIEW IN EMBL-EBI]
GO:0009788        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009968        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010648        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0023057        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071368        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901419        [VIEW IN EMBL-EBI]
GO:1901420        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1905957        [VIEW IN EMBL-EBI]
GO:1905958        [VIEW IN EMBL-EBI]
GO:2000023        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000069        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2000280        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGTGGTTCGATTAGATTTCGTGAGAGATCGGGTTGTAGACCCTGCTACAACTTTCATGACTCAGATGATGACGATGTGAAATCTACAGAAAATTATCAGAATGTGGGTGGAAGCTCCACTCAACAAAAACGAAAAAATAGCGACGATTCAGTTGTTCTCCCGAGGAAACGAGGGAGACCTAGAAAAAACATCGCGAGAAGTGATACAACTGAGAGTAATGTGACCCCTTTTGCTGAGCGGCTTCGTGACAGATCAAGTATAAAGAAGCCGAACTATAATATTGACGAGTCTGATGAAGATTTTGATACTTTCCCCAGTAAATATGGGAACCAGGAAAAAGTTCTTAAAATCGAAAGCAGTGACACAGTTAGCCCACTCAAAGATATTGACAAGATATTAGATTGTGAGATGCGTTCTGTGGTGGCTGCTGAAAGTGATGCTCAAAAGTTGGAGTCAAAACGTATTTTGGTCAAGCAATATCTTGTTAAGTGGAAGGGACTCTCATATTTGCACTGCACATGGGTTCCAGAAGAAGAGTTTTTGAAGGCTTTCAAGACTCAGCCAGGTCTAAAGATCAGAGTAAACAGCTTCCATCGTCGTATGGAATCAGCCAAGAGTTTTGATGAAGATTTTGTTGCCATTAGACCCGAATGGACTATGGTTGATCGAATACTTGCTTGCAGGTGGGGTAACGATGATAAGAAGGAGTATCTGGTGAAGTGGAAAGAGCTTCCCTATGATGAGTGCCACTGGGAGCTGGAATCAAATATCTCTGCATTTCAGAAAGAAATAGAAAGATTCTACACATTTCAGTGTAGAACAAGGACAGTTTTGTCCAATAAGAAAAGTAGTATTGCAGAAGCTTCTGAATCTAATAATCTGCAGAGAGAATTTGTACAGTACGAAGCCAGCCCTGAGTTTCTTTCAGGGGGTTCACTGTATCCGTATCAGCTTGAAGGATTGAACTTCTTACGATATTCATGGTCCAAGCAAACTCACGTTATACTTGCTGATGAAATGGGACTTGGCAAAACCATACAGAGCATTGCTTTCATGGCATCGCTGTTTGAGGATAATGTTTGTCCCCATTTGGTGATTGCTCCCCTTTCAACTTTACGAAATTGGGAGCGTGAATTTGCTACGTGGGCACCTGAAATGAATGTTGTTATGTATTCTGGATCTGCCGATGCTCGTGCTTTAATCAGAGAGTATGAGTTTTACTTTCCTAAAGGTCTTCGCTCAAAGAAAGGCAAAGAAATCGTGGATGAAAGAAAAAGAAGAAGAGTAAAGTTTGACGTTCTATTAACGTCATACGAGACAATAATTTCCGACTCATCCTCGTTAAAACCTATAAAGTGGGAGTGCATGATAGTTGATGAGGGCCACCGTCTGAAGAACAAAAATTCTAAATTATTTTCTCCATTGACGCAATTATCAAGCCAACACCGTGTGCTTTTGACTGGAACTCCTCTTCAGAACAATTTGGATGAGCTTTTTATGCTGATGCACTTCCTTGATGCTGAAAAGTTTGGAAGTTTAGAGGAGTTTCAGAAAGAATTTAAGGATATCAATAGAGAGGAGCAGATTCTGAGACTACAAAAAATGTTGGCACCACATCTCTTGAGAAGAATGAAGAAAGATGTGATGACAGAACTACCTCCGAAAAAGGAACTTATTTTACGAGTTGAATTATGCAGTGTACAGAAAGAATTCTACAAGGCAATTCTGAATCGTAATTATCCTATATTAACCCGCCGAGCTCGTCCACATATTTCTCTTATCAATGTTGTTATGGAACTGCGTAAGCTCTGCTGCCATCCCTTTATGTTAAATGGACTTCAACCTGATCTTAATGATGAAAATCCATATGACCAATTGCTTGAATCCTCTGGGAAGTTGCAACTGTTAGACAAGATGATGGTGAAACTTAAAGAGCAAGGTCATAGAGTCCTTATATGTTCCCAATTTCAGAAAATGCTGGACTTGCTTGAAGATTACTGTTGTTACAAGAATTGGCATTATGAGAGGATAGATGGGAAGGTTGGAGGAGCTGAAAGACAAGAAAAGATAGATCGGTTTAATGCTGAAGATTCTTCAAGATTTTGTTTTCTTCTTTCTACAAGAGCTGGGGGATTAGGGATAAACCTTACTGCAGCAGACACAGTTATTATATATGACAGTGATTGGAATCCTCATGCTGACTTGCAAGCCATGGCCAGGTCTCACCGCCATGGACAGAAAAAGAAGGTGATGATTTATAGGTTCATAGCAAGAGGAACAATTGAAGAAAGGATGATTCAGCTGACAAAGAAGAAAAGGGTGTTAGAACACCTGGTTGTAGGGAGGCTACAGGATGAAAACATTAAGCAGAAAGAGTTAGATGATATCGTAAGGTATGGCTCAGAGGAGCTATTTGCTGATGAAAATGATGAAGCAAGCAGGTCTCGTCAAATTCATTATGATGATGATGCTATAGACAGATTGCTGGATCGTGATGGAGTTGGAGGTGAAGATGCTGCTTTGAATGGTGAAGATGAAGATGGATTTCTGAAGGCTTTTAAGGTGGCAAATTTCGAATACATAGACGGAGTTAAGCCAGCAGAGGAGGTGGCACAAAATGAAGCAAAGGAGAATCAATTCTCTGGTGAAAGTTTGAGGATAATTATTTACTGGGAAGGCTTGTTGAGAAAAGCATATGAACAGTGTCAAGTTGAAAAGTTAAATGCCTTAGGCAAAGGGAAGCGAACACGCACCAAATGGGTGGGGGAAGGTTTTAGTAAATGGGTAGATCAAAGATCTGATGGTGAAGATGAAAATTATGAAGGGGATCATAGTGAATATGATTCAAATGAGACTACTACTCCTACTAGAAGGGTTCACGGAAAGAAATCTCGCGCAGAGAGCCCAGAGCCACATCCTTTGATGGAACGTCGAGGAAAATCGTTGAAAGTACTTGGTTTTAGTCCAAATCAAAGGGCTCAATTTCTTCAAATTATGATGAGGTTTGGTTTACGTGATTTTGATTGGAAAAAGTTTGCTTCCAGGATGAAACACAAGAGTTATGAAGAAATCATGGAGTATAGCTTACTTTTTTTGTCTCATGTTATAGAAGATATTACTGATTCACCTACATTCATAGATGGCGTTCCAAAAGAAGGACTTCAAATAAAAACTGCACTTCTAAGGATCGGTGTTATGAATTTGATAGCAAAAAAGGTGAAGCTTGCATTAGAAAATCCTGGAACACAACTTTTTTCAGATGATATCTTACCACGCCATCCACGTATGAAGGGTAGAAAGATATGGAAGGAGGTTCATGATTTACTGCTGCTGCAAGCCGTGTTGAAGCATGGCTATGCGAGGTGGCGTGATATTGTTGAAGATAAGGATCTGAAGATTCAGAAGGTTATCTGTGAGGAGTTGAATATTGCAGTTGCAGATATACCAGTTGAATTACAGTGTAACTCACGAGTGTTCAATGGTCCAAATATTACAAATGTGGAGTCTTGCTCCAGCTCCAACCAATCTAAGCAGAGTGAAATGCGCAGTTCTAGTAATCTTGGGAAGCACGCAAAGTCAAATATGGATTTCTTCCTGTTGGATCAGCATAGAAAAATGCAGAGAGCACAGATTCTGTTTATAAAGAGAAGGTTTCGTCTCTTGGAAGAAGGTCTCCTCGTTGAGTTCCAGAACAGATACCTTAGGAATTTGCCAGCAAAAGTGGCAGAAAACAACCAAGTTAAAGGCAGGCCCACGCGAGTTAATGTAAACAAGTTCATCGTCTTTGAGACTTTTCCTCGGCCTATAGTCAGAGTCATAAGTACACCGGACTTGTATTATTTTTTATTTGATTTTGATACAGAGCGTATAAACTTAATTGCTCTTTACAATGAGATGTGCCAGATTGTGGCGGCATTCGCCAAAGAATTAGCCCAAGCGGCAACAGATGAGGAACAATACGACGCTGTTGCCCGGTTAGGTCAAATCCTCAGCATTTGTTTCGATATCAATGAAGTTCTACATAAAAAAGATTAA
Protein:  
MSGSIRFRERSGCRPCYNFHDSDDDDVKSTENYQNVGGSSTQQKRKNSDDSVVLPRKRGRPRKNIARSDTTESNVTPFAERLRDRSSIKKPNYNIDESDEDFDTFPSKYGNQEKVLKIESSDTVSPLKDIDKILDCEMRSVVAAESDAQKLESKRILVKQYLVKWKGLSYLHCTWVPEEEFLKAFKTQPGLKIRVNSFHRRMESAKSFDEDFVAIRPEWTMVDRILACRWGNDDKKEYLVKWKELPYDECHWELESNISAFQKEIERFYTFQCRTRTVLSNKKSSIAEASESNNLQREFVQYEASPEFLSGGSLYPYQLEGLNFLRYSWSKQTHVILADEMGLGKTIQSIAFMASLFEDNVCPHLVIAPLSTLRNWEREFATWAPEMNVVMYSGSADARALIREYEFYFPKGLRSKKGKEIVDERKRRRVKFDVLLTSYETIISDSSSLKPIKWECMIVDEGHRLKNKNSKLFSPLTQLSSQHRVLLTGTPLQNNLDELFMLMHFLDAEKFGSLEEFQKEFKDINREEQILRLQKMLAPHLLRRMKKDVMTELPPKKELILRVELCSVQKEFYKAILNRNYPILTRRARPHISLINVVMELRKLCCHPFMLNGLQPDLNDENPYDQLLESSGKLQLLDKMMVKLKEQGHRVLICSQFQKMLDLLEDYCCYKNWHYERIDGKVGGAERQEKIDRFNAEDSSRFCFLLSTRAGGLGINLTAADTVIIYDSDWNPHADLQAMARSHRHGQKKKVMIYRFIARGTIEERMIQLTKKKRVLEHLVVGRLQDENIKQKELDDIVRYGSEELFADENDEASRSRQIHYDDDAIDRLLDRDGVGGEDAALNGEDEDGFLKAFKVANFEYIDGVKPAEEVAQNEAKENQFSGESLRIIIYWEGLLRKAYEQCQVEKLNALGKGKRTRTKWVGEGFSKWVDQRSDGEDENYEGDHSEYDSNETTTPTRRVHGKKSRAESPEPHPLMERRGKSLKVLGFSPNQRAQFLQIMMRFGLRDFDWKKFASRMKHKSYEEIMEYSLLFLSHVIEDITDSPTFIDGVPKEGLQIKTALLRIGVMNLIAKKVKLALENPGTQLFSDDILPRHPRMKGRKIWKEVHDLLLLQAVLKHGYARWRDIVEDKDLKIQKVICEELNIAVADIPVELQCNSRVFNGPNITNVESCSSSNQSKQSEMRSSSNLGKHAKSNMDFFLLDQHRKMQRAQILFIKRRFRLLEEGLLVEFQNRYLRNLPAKVAENNQVKGRPTRVNVNKFIVFETFPRPIVRVISTPDLYYFLFDFDTERINLIALYNEMCQIVAAFAKELAQAATDEEQYDAVARLGQILSICFDINEVLHKKD